Proteomics Data Scientist

San Mateo, CA

Who we are

At PrognomiQ, we aim to transform healthcare by generating and using systems biology data to develop and commercialize tests for early detection and treatment of cancer and other complex diseases. To accomplish this, we are leveraging leading proteomics technology, including the Proteograph product suite from Seer Bio, in combination with other multi-omics assays to develop unprecedented molecular views of health and disease. We are a team of experienced and accomplished scientists supported by a group of leading investors in healthcare and technology.

Would you like to be part of a team that is at the leading edge of molecular data generation and analyses that changes how cancer and other complex diseases are detected and treated? Do you aspire to be on the cutting edge of ‘omics technology and data science development? Are you looking to be part of a world class scientific team striving to bring disruptive solutions to market? Do you thrive in an environment of cross-functional disciplines and innovation? If you answer “yes” to either of these questions, let us know by applying!

Description of role

This a hybrid work position with expectations of being onsite several times a week.

Duties

  • Support assay development to refine assay chemistry and improve signal-to-noise ratios.
  • Collaborate with analytical chemists to design experiments and optimize workflows.
  • Design and develop mass spectrometry data processing pipelines and algorithms.
  • Evaluate analysis methods for mass spectrometry data.
  • Analyze proteomics mass spectrometry data to uncover disease-specific signals.
  • Contribute reproducible, reusable, and robust code to the internal codebase.
  • Document results of analyses and investigations in a reproducible manner.
  • Communicate insights to both experts and non-experts via presentations and publications.

Requirements

  • Ph.D. in bioinformatics or related discipline with 3+ years of relevant industry experience
  • Expertise in mass spectrometry-based protein quantification and identification.
  • Expertise in current computational tools required to process and analyze MS data.
  • Ability to troubleshoot and interpret complex mass spectrometry data.
  • Demonstrated skills in proper experimental design.
  • Proficiency in at least one general purpose coding language such as Python or R.
  • Proficiency in general statistical methods as commonly used in the field.
  • A record of quality publications or positions of increasing responsibility in industry.
  • Excellent communication and collaboration skills.

Equal Opportunity Employment

PrognomiQ is an equal opportunity employer that celebrates diversity and inclusion in the workplace. We prohibit discrimination and harassment of any kind based on race, color, sex, religion, sexual orientation, national origin, disability, genetic information, pregnancy, or any other characteristic protected by law. This policy applies to all employment practices within our organization, including hiring, recruiting, promotion, termination, layoff, recall, leave of absence, compensation, benefits, training, and apprenticeship.